COMICS is an interactive web platform for integration and cartoon-style visualization of omics expression data in zebrafish and carp model systems. Anatomical ontologies are used to map omics data across experiments and between experiments and a particular visualization. COMICS is built on top of the ZFA ontology with its rich controlled vocabulary and defined hierarchy, and uses the ontoCAT R package to aggregate data for comparison and visualization. Libraries from the QGIS geographical information system are used with the R packages maps and maptools to visualize and interact with molecular expression data in anatomical drawings of zebrafish and carp model systems.
Download COMICS as a Docker image here.
Alternatively, COMICS can be accessed from GitHub here.
Copyright Notice
COMICS is copyright (c) 2016 Dmitrii Travin, Iaroslav Popov, Dmitry Medvedev, Arzu Tugce Güler and Magnus Palmblad
This work is licensed under a
Creative Commons Attribution-Share Alike 3.0 License.
magnus.palmblad@gmail.com